Journal Papers
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1. R. Khosrowabadi, M. Sadeghi, F. Bakouie, H. Mahdavi, C. Eslahchi and H. Pouretemad,
Screening of autism based on task-free fMRI using graph theoretical approach,
Psychiatry Research: Neuroimaging  (to appear) [abstract]   
2. F. Taher Ghahramani and A. Tirandaz,
Perturbative treatment of quantum to classical transition in chiral molecules: dilute phase versus condensed phase,
Journal of Physics B: Atomic, Molecular and Optical Physics 50(2017),   [abstract]   
3. N. Ansari-Pour, Z. Razaghi Moghadam, F. Barneh and M. Jafari,
Testis-Specific Y-Centric Protein�??Protein Interaction Network Provides Clues to the Etiology of Severe Spermatogenic Failure,
Journal of proteome research 15(2016), 1011-1022  [abstract]   
4. A. Malekpour, H. Pezeshk and M. Sadeghi,
PSE-HMM: genome-wide CNV detection from NGS data using an HMM with Position-Specific Emission probabilities,
BMC Bioinformatics  (to appear) [abstract]   
5. R. Jafari, M. Sadeghi and M. Mirzaie,
Investigating the importance of Delaunay-based definition of atomic interactions in scoring of protein�??protein docking results,
J. Mol. Graphics and Modelling 16(2016), 108�??114�??�??  [abstract]   
6. S. A. Malekpour, H. Pezeshk and M. Sadeghi,
MGP-HMM: detecting genome-wide CNVs using an HMM for modeling mate pair insertion sizes and read counts,
Mathematical Biosciences (2016), 53-62  [abstract]   
7. V. Rezaei Tabar and H. Pezeshk,
Generalized Profile Hidden Markov Model (PHMM) based on the Dependency between sequences,
Progress in Biological Sciences  (to appear) [abstract]   
8. V. Rezaei Tabar, F. Eskandari and S. Salimi,
A novel node ordering method using L1-regularized Markov Blanket and modified likelihood reduction factor for the K2 algorithm,
pattern recognition letter  (to appear) [abstract]   
9. M. H. REYHANI and H. Poormohammadi,
RPNCH: A Method for Constructing Rooted Phylogenetic Networks from Rooted Triplets based on Height Function,
Indian Journal of Science and Technology  (to appear) [abstract]   
10. T. Baghfalaki, M. Ganjali and D. Berridge,
Missing Value Imputation for RNA-Sequencing Data Using Statistical Models: A Comparative Study,
J. Appl. Statist.  (to appear) [abstract]   

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