Papers
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1. F. Mohseni-Salehi, F. Zare-Mirakabad, M. Sadeghi and S. Ghafouri-Fard,
A Stochastic Model of DNA Double-Strand Breaks Repair Throughout the Cell Cycle,
Bulletin of Mathematical Biology 82(2021), 1-36  [abstract]   
 
2. H. Poormohammadi and M. Sardari Zarchi,
Netcombin: An algorithm for constructing optimal phylogenetic network from rooted triplets,
Plos One 15(2020), https://doi.org/10.1371/journal.pone.0227842  [abstract]   
 
3. A. Emdadi and Ch. Eslahchi,
DSPLMF: A Method for Cancer Drug Sensitivity Prediction Using a Novel Regularization Approach in Logistic Matrix Factorization,
Frontiers in Genetics 11(2020), 75  [abstract]   
 
4. F. Ahmadi Moughari and Ch. Eslahchi,
ADRML: anticancer drug response prediction using manifold learning,
Scientific Reports 10(2020), 1-18  [abstract]   
 
5. S. A. Malekpour, A. R. Alizad-Rahvar and M. Sadeghi,
LogicNet: probabilistic continuous logics in reconstructing gene regulatory networks,
BMC Bioinformatics 21(2020), 1-21  [abstract]   
 
6.
LogicNet: probabilistic continuous logics in reconstructing gene regulatory networks,
BMC Bioinformatics 21(2020), 1-21  [abstract]   
 
7. C. Razavi Pashabayg, N. Momenifar, S. A. Malekpour, M. Sadeghi, A. Rahimi Foroushani, H. Rafatpanah, N. Valizadeh, F. Sabet, S. M. Jazayeri, H. Keyvani, S. A. Rezaee and M. Norouzi,
Phylogenetic and phylodynamic study of Human T-cell lymphotropic virus Type 1 (HTLV-1) in Iran,
Infection, Genetics and Evolution  (to appear) [abstract]   
 
8. N. Khorasani, M. Sadeghi and A. Nowzari-Dalini,
A Computational Model of Stem Cell Molecular Mechanism to Maintain Tissue Homeostasis,
bioRxiv  (to appear) [abstract]   
 
9. P. Urban, V. Rezaei Tabar, G. Bokota, M. Denkiewicz, S. Basu and D. Plewczy�?ski,
Dendritic Spines Taxonomy: The Functional and Structural Classification �?� Time-Dependent Probabilistic Model of Neuronal Activation,
Journal of Computational Biology (2020), https://doi.org/10.1089/cmb.2018.0155  [abstract]   
 
10. P. Urban, V. Rezaei Tabar, M. Denkiewicz, G. Bokota, N. Das, S. Basu and D. Plewczynski,
The Mixture of Autoregressive Hidden Markov Models of Morphology for Dentritic Spines During Activation Process,
Journal of Computational Biology (2020), https://doi.org/10.1089/cmb.2019.0383  [abstract]   
arXive.org link: https://doi.org/10.1089/cmb.2019.0383 [ abs, src, ps, others], cited by
 

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