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211.	Z. Safikhani. , M. Sadeghi. , H. Pezeshk. and C. Eslahchi. , SSP: An interval integer linear programming for de novo transcriptome assembly and isoform discovery of RNA-seq reads, Genomics 102(2013), 507-514 [abstract]

212.	S.A.Marashi. Marashi, H.Kouhestani. Kouhestani and M.Mahdavi. Mahdavi, Studying The Relationship Between Robustness Against Mutations In Metabolic Networks And Lifestyle Of Organisms., The Scientific World Journal 2013(2013), http://dx.doi.org/10.1155/2013/615697 [abstract]

213.	M.M. Ghahremanpour, Sh. Arab, S. Biook Aghazadeh, J. Zhang and D. van der Spoel, A Web-Based Graphical Interface To Build Heterogeneously Mixed Membrane Bilayers For The GROMACS Biomolecular Simulation Program., BMC Bioinformatics (2013), 1-27 [abstract]

214.	E. Salehghamari. , J. Hamedi. , E. Elahi. , Z. Sepehrizadeh. , M. Sadeghi. and G. Muth. , Prediction of the pho regulon in Streptomyces clavuligerus DSM, New Microbiologica 35(2012), 447 [abstract]

215.	R. Aghdam. , H. Pezeshk. , S.A. Malekpour. , S. Shemehsavar. , M. Sadeghi. and C. Eslahchi. , A Clustering Approach for Estimating Parameters of a Profle Hidden Markov Model, International Journal of Data Mining and Bioinformatics 8(2012), 66-82 [abstract]

216.	C. Eslahchi. and F. Movahedi. , Calculation Of Transition Probabilities In The Birth And Death Markov Process In The Epidemic Model, Math. Comput. Model 55(2012), 810-815 [abstract]

217.	R. Hassanzadeh. , C. Eslahchi. and W. K. Sung. , Constructing Phylogenetic Supernetworks Based On Simulated Annealing, Molecular Phylogenetics and Evolution 63(2012), 738-744 [abstract]

218.	C. Eslahchi. , R. Hassanzadeh. , E. Mottaghi. , M. Habibi. , H. Pezeshk. and M. Sadeghi. , Constructing Circular Phylogenetic Networks From Weighted Quartets Using Simulated Annealing, Mathematical Biosciences 235(2012), 123-127 [abstract]

219.	M. Mirzaie. and M. Sadeghi. , Distance-Dependent Atomic Knowledge-Based Force In Protein Fold Recognition, Protein Journal 80(2012), 683-690 [abstract]

220.	K. Kavousi. , M. Sadeghi. , B. Moshiri. , B. N. Araabi. and A. A. Moosavi-Movahedi. , Evidence Theoretic Protein Fold Classification Based On The Concept Of Hyperfold, Mathematical Biosciences 240(2012), 148-160 [abstract]

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