Papers
   Journal Papers
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21. P. Nickchi, M. Jafari and S. Kalantari,
PEIMAN 1.0: Post-translational modification Enrichment, Integration and Matching ANalysis,
Database (2015),   [abstract]   
 
22. M. Mirzaie and F. Kheradmand ,
Bioactive lipids in emphysema. Decoding fat to reveal COPD phenotypes,
American journal of respiratory and critical care medicine 191(2015), 241-243  [abstract]   
 
23. J. Montojo. , P. Khosravi. , V. H. Gazestani. and G. D. Bader. ,
SIREN Cytoscape plugin: Interaction Type Discrimination in Gene Regulatory Networks,
arXiv (2015), arXiv preprint arXiv:1512.05067  [abstract]   
 
24. P. Khosravi. and E. Ebrahimie. ,
Does the overall shape of gene networks differ between cancer and normal states? Towards a comprehensive understanding of cancer system biology by meta-analysis of various cancer transcriptomes,
The RECOMB/ISCB conference on Regulatory and System Genomics with DREAM challenge (2015), 101-102  [abstract]   
 
25. M. Jalili. , A. Salehzadeh-Yazdi. , Y. Asgari. , S. Arab. , M. Yaghmaie. , A. Ghavamzadeh. and K. Alimoghaddam. ,
CentiServer: A Comprehensive Resource, Web-Based Application and R Package for Centrality Analysis,
Plos One 10(11) - doi:10.1371/ journal.pone.0143111(2015),   [abstract]   
 
26. A. Nodehi. , M. Golalizadeh. and A. Heydari. ,
Dihedral angles principal geodesic analysis using nonlinear statistics,
J. Appl. Statist. DOI:10.1080/02664763.2015.1014892(2015), 1962-1972  [abstract]   
 
27. M. Habibi. , P. Khoda bakhshi. and R. Aghdam. ,
LRC: A new algorithm for prediction of conformational B-cell epitopes using statistical approach and clustering method,
Journal of immunological methods doi:10.1016/j.jim.2015.09.006(2015),   [abstract]   
 
28. M. Amini. and M. Roozbeh. ,
Optimal partial ridge estimation in restricted semiparametric regression models,
J. Multivariate Anal. http://dx.doi.org/10.1016/j.jmva.2015.01.005(2015), 26-40  [abstract]   
 
29. P. Khosravi. , V. H. Gazestani. , B. Law. , G. D. Bader. and M. Sadeghi. ,
Comparative analysis of co-expression networks reveals molecular changes during the cancer progression,
IFMBE 51(2015), 1481  [abstract]   
 
30. P. Khosravi. , V. H. Gazestani. , L. Pirhaji. , B. Law. , M. Sadeghi. , B. Goliaei. and G. D. Bader. ,
Inferring interaction type in gene regulatory networks using co-expression data,
AMB Vol: 10, DOI: 10.1186/s13015-015-0054-4(2015), 23  [abstract]   
 

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